How do I cite NCBI GenBank?

How do I cite NCBI GenBank?

To cite the entire NCBI site, use this format:

1. National Center for Biotechnology Information (NCBI)[Internet]. Bethesda (MD): National Library of Medicine (US), National Center for Biotechnology Information; [1988] – [cited 2017 Apr 06].
2. Gene [Internet].
3. Nucleotide [Internet].

How do you cite RefSeq?

It is appropriate to cite the RefSeq accession number (with version), the NCBI Handbook, or the most recent RefSeq project article in a Nucleic Acids Research Database issue.

What does GenBank stand for?

Acronym. Definition. GENBANK. National Genetic Sequence Data Base.

Where is GenBank located?

Bethesda, MD
GenBank (1) is a comprehensive public database of nucleotide and protein sequences with supporting bibliographic and biological annotation, built and distributed by the National Center for Biotechnology Information (NCBI), a division of the National Library of Medicine (NLM), located on the campus of the US National …

What type of source is NCBI?

The NCBI houses a series of databases relevant to biotechnology and biomedicine and is an important resource for bioinformatics tools and services. Major databases include GenBank for DNA sequences and PubMed, a bibliographic database for biomedical literature. Other databases include the NCBI Epigenomics database.

What is the difference between RefSeq and GenBank?

GenBank sequence records are owned by the original submitter and cannot be altered by a third party. RefSeq sequences are not part of the INSDC but are derived from INSDC sequences to provide non-redundant curated data representing our current knowledge of known genes.

What is RefSeq ID?

The RefSeq ID is a unique identifier given to a sequence in the NCBI RefSeq database. The RefSeq database is a curated, non-redundant set including genomic DNA contigs, mRNAs and proteins for known genes, and entire chromosomes. These variables are used to make the Web link to the RefSeq database.

Why is GenBank used?

The GenBank database is designed to provide and encourage access within the scientific community to the most up-to-date and comprehensive DNA sequence information. Therefore, NCBI places no restrictions on the use or distribution of the GenBank data.

Which is the biggest division of GenBank?

GenBank is divided into three divisions: the main collection called CoreNucleotide; dbEST, which is a collection of short single-read transcript sequences from GenBank, which provides a resource to evaluate gene expression, find potential variation, and annotate genes, with 432,972 annotated for pancreas; and dbGSS ( …

Is NCBI trustworthy?

The databases at the NCBI/DDBJ/EMBL will definitely contain errors as the data comes from various sources and most of the databases are only marginally curated. But that holds true for all big databases without manual curation (and even those are not flawless).

Where can I find the GenBank sequence database?

The GenBank sequence database is an open access, annotated collection of all publicly available nucleotide sequences and their protein translations. This database is produced and maintained by the National Center for Biotechnology Information (NCBI) as part of the International Nucleotide Sequence Database Collaboration (INSDC).

Where can I find the NIH GenBank database?

GenBank ® is the NIH genetic sequence database, an annotated collection of all publicly available DNA sequences ( Nucleic Acids Research, 2013 Jan;41 (D1):D36-42 ). GenBank is part of the International Nucleotide Sequence Database Collaboration , which comprises the DNA DataBank of Japan (DDBJ), the European Nucleotide Archive (ENA),

How can I access data from the NCBI Genbank?

GenBank is accessible through the NCBI Entrez retrieval system, which integrates data from the major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and the biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases.

Are there any restrictions on the use of GenBank data?

GenBank Data Usage. The GenBank database is designed to provide and encourage access within the scientific community to the most up-to-date and comprehensive DNA sequence information. Therefore, NCBI places no restrictions on the use or distribution of the GenBank data. However, some submitters may claim patent, copyright,…